Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDP-GCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWC-----FLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH---VYHGQEAAQQRPRDSEVEM----MAQLLGIMVVAS-VCWLP-----LLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
| 3PQR Chain:A ((49-311)) | -----------------------------------MLGFPINFLTLYVTVQHKK----LRTPLNYILLNLAVADLF--MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV---LAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFV-------VHFIIPLI-VIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTS--------------AVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175914 for 1733 contacts (-101.5/contact) +
2D Compatibility (PS) -25314 + (NN) -13321 + (LL) 4408
1D Compatibility (HY) -26800 + (ID) 3250
Total energy: -240191.0 ( -138.60 by residue)
QMean score : 0.215
|
|
|