Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVANCGQVVSYLAPCISYAMGRVSVPGGGC---CSGVRGLNAAAA-----------TPADRKATCTCLKQQASGM-----GGIKPDLVAGIPSKCGVNIPYAISPRTDCSKVR-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA--GSVVDALRAVRNA------APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28359 for 414 contacts (-68.5/contact) +
2D Compatibility (PS) -8490 + (NN) -3135 + (LL) 376
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -42508.0 ( -102.68 by residue)
QMean score : 0.413
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