Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVQCGQVTQLMAPCMPYLSGAPGMTPYGICCNSLGVLNQLAASTADRVAACNCVKAAASGFPAVDFSRAAALPAACGLAINFAVTPNMDCNQVTDEP
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGG-P-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72787 for 622 contacts (-117.0/contact) +
2D Compatibility (PS) -9326 + (NN) -3286 + (LL) 200
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -95199.0 ( -153.05 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: