Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACE--VGQLTVCMPAIT-TGAKPSGACCGNLR-----------AQQACFCQYAKDPSLARYITSPHARETLVSCGLAVP---------HC---
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21487 for 378 contacts (-56.8/contact) +
2D Compatibility (PS) -6238 + (NN) 1520 + (LL) 516
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -29739.0 ( -78.67 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: