Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATTACVPT--QLTPCAPAIVGNAAPTAACCARLKA-----------HPASCFCQYKKNPNMQRY--VNSPNGKKVFAACKVPLPKC
1T12 Chain:A ((2-78))
--ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQ-IACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10721 for 390 contacts (-27.5/contact) +
2D Compatibility (PS) -5839 + (NN) 2263 + (LL) 740
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -18757.0 ( -48.09 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: