Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------ATCNALQLTPCAGAIIGSAAPTASCCSKMKEQQP-----CMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC---------------------
2LSE Chain:A ((1-101))
MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPN--AVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8956 for 431 contacts (-20.8/contact) +
2D Compatibility (PS) -6856 + (NN) -996 + (LL) -108
1D Compatibility (HY) -800 + (ID) 600
Total energy: -18316.0 ( -42.50 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_2LSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LSE-query.scw
PDB file :
Tito_Scwrl_2LSE.pdb
: