Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KTLILGEEVKATCDFT--KFQVCKPEIITGSPPSEECCEKLKE-----------QQSCLCAYLISPSISQY--IG--NAKRVIRACGIPFPNCS
1T12 Chain:A ((2-78))
----------ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24313 for 376 contacts (-64.7/contact) +
2D Compatibility (PS) -6032 + (NN) -2515 + (LL) 1212
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -36498.0 ( -97.07 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: