Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKNPVLLPRLLIACRVPHPKC
1KG1 Chain:A ((1-60))
DRCRYTLCCDGALKAVSACLHESESCLV--------PGDCCRG--KSRLTLCSYGEGGNGF------QCPTGYRQC
General information:
TITO was launched using:
RESULT:
Template:
1KG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14747 for 221 contacts (-66.7/contact) +
2D Compatibility (PS) -4996 + (NN) 2277 + (LL) 1548
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -18618.0 ( -84.24 by residue)
QMean score : 0.137
(partial model without unconserved sides chains):
PDB file :
Tito_1KG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KG1-query.scw
PDB file :
Tito_Scwrl_1KG1.pdb
: