Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQLSQLAPCARYSV----PPLPGQALPA--PGPECCSALGSVSRDCACGAID--------------------------------IINSL--PAKCGLPRVSCQ
1BEA Chain:A ((14-109))
----------HNPLPSCRWYVTSRTCGIGP--RLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32867 for 332 contacts (-99.0/contact) +
2D Compatibility (PS) -5602 + (NN) -1148 + (LL) 140
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -45077.0 ( -135.77 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: