Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGGGGGECVPQL---NRLLACRAYAVPGA-------GD-----PSAECCSALSSISQGCACSAIS-----------------IMNSLPSRCHLSQINCSA
1S6D Chain:A ((9-102))
-----SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQ-
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50438 for 396 contacts (-127.4/contact) +
2D Compatibility (PS) -6497 + (NN) -1423 + (LL) -424
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -66032.0 ( -166.75 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: