Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMTQAELNECLPAVSKNNPTSPSLLCCNALKHAD----------YTCLCGYKNSPWLGSF-GVDPKLASSLPKECDLTNAPTC
2ALG Chain:A ((3-79))
--TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL--SASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22878 for 424 contacts (-54.0/contact) +
2D Compatibility (PS) -6842 + (NN) -3896 + (LL) -280
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -38096.0 ( -89.85 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: