Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APRGAHGAGECGRTPADEMALKLAPCASAGQDPNSAPSSGCCTAVRTIGKQSPKCLCAVMLSDTAKSAGIKPEAAISIPKRCNLVDRPVGYKCGAYTLP
1N89 Chain:A ((5-64))
--------------------SQLAVCASAILSG-AKPSGECCGNLRAQ---Q-GCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAV-------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22710 for 369 contacts (-61.5/contact) +
2D Compatibility (PS) -6098 + (NN) -1415 + (LL) 724
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -32399.0 ( -87.80 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: