Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADRPVGYKCGDYTLP
1N89 Chain:A ((5-65))
---------------SQLAVCASAILSG-AKPSGECCGNLRAQ---Q-GCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVP------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23264 for 385 contacts (-60.4/contact) +
2D Compatibility (PS) -6070 + (NN) -878 + (LL) 72
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -32990.0 ( -85.69 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: