Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ERCNDSGIEVLRGCPDSIDKELPTPPRPSQGCCTLVRIIGM----------ECVCEVINKEIEAAIDMQKLVNVAAACGRPLA----PGSQCGSYLVPGGMIRH
1SIY Chain:A ((2-90))
-TCGQVQGNL-AQCIGFLQKGG----VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI---------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17813 for 527 contacts (-33.8/contact) +
2D Compatibility (PS) -7677 + (NN) -4024 + (LL) 352
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -31512.0 ( -59.80 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: