Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYRPWPSECVEVANVMVEQCKMFFVHQESPPTAECCRWFSSRRKYAKERRRLCRCLE--FLTTAFKNLKPDVLALSDQ-----CHFSSGFPMSRDHTCA-------------------------------- |
| 3IJ6 Chain:A ((3-305)) | LTKIDAYAHILPAKYYQKMLSVEPNIPNMFPFIKIKTLMDLDERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSANEELSNLVDQHPGKFAGAVAILPMNNIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQDYP------------NLKILVHHAGAMVP------FFSGRIDHILDEKHAQDFKKFYVDTAILGNTPALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIITQAINDLTISDKDKQKIFHDNYYSLIKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IJ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2232 for 419 contacts (-5.3/contact) +
2D Compatibility (PS) -8050 + (NN) -5292 + (LL) 1996
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -16628.0 ( -39.68 by residue)
QMean score : 0.153
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