Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------KMVTYPNGDRHCVMAQGQVISACLQQANGLPHADCCYAINDVNRYVETIYGRLALCKCFQEILKDSR-FTKLIGMPE--------KCAIP----NAVPFDPKTDCDRFVEHIWLKMF
2HFT Chain:? ((107-218))
NLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLS--LRDVFG---KDLIYTL-----YYWKSSGK-------KTAKTNTNEF--LIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMG----------
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18427 for 377 contacts (-48.9/contact) +
2D Compatibility (PS) -8057 + (NN) -2176 + (LL) 2668
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -30092.0 ( -79.82 by residue)
QMean score : 0.052
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: