Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQVDS--DLTSCLGYARKGGVIPP---GCCAGVRTLNNLAK-----------TTPDRQTACNCLKSLVNPS-----LGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35495 for 459 contacts (-77.3/contact) +
2D Compatibility (PS) -8664 + (NN) -351 + (LL) -500
1D Compatibility (HY) -400 + (ID) 850
Total energy: -46260.0 ( -100.78 by residue)
QMean score : 0.457
|
|
|