Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGQVTSGLAPCLPYLQGRG-PIGGCCGGIKGLLGAAKTPADRKTACTCL--KSAASAIKGINVGKAAGIPRLCGVNIPYKISPSTDCSKVR
1N89 Chain:A ((4-65))
------ASQLAVCASAILSGAKPSGECCGNLRA-----------QQGCFCQYAKDPTYG-QYIRSPHARDTLTSCGLAVP-------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17946 for 365 contacts (-49.2/contact) +
2D Compatibility (PS) -5802 + (NN) 536 + (LL) 1684
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -24378.0 ( -66.79 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: