Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGTVASSLAPCAGYLTKGGAVPAPCCAGVSKLNGMAKTTPDRQQACKCLKAAAQ---SINPSLASGLPGKCGVSIPYPISMSTNCDNVK
1SIY Chain:A ((1-91))
-MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSIN
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60052 for 666 contacts (-90.2/contact) +
2D Compatibility (PS) -9423 + (NN) -6155 + (LL) 144
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -86286.0 ( -129.56 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: