Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VSCGDAVSALIPCGSFLLGVGAPKPSSECCASAQSLNKLTTTTADRRAVCQCFVKSGPSFGVKPARTKLLPSLCKLN--INIPVTPNVDCNK--------------
1F1Z Chain:A ((169-267))
------NPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGD-ENIINVCKQVDIAYDLELGKTLSEIRALTANGFIKFNIYKSFRANKCADLCISQVVNMEE
General information:
TITO was launched using:
RESULT:
Template:
1F1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17960 for 516 contacts (-34.8/contact) +
2D Compatibility (PS) -8419 + (NN) -3142 + (LL) 216
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -34305.0 ( -66.48 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1F1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F1Z-query.scw
PDB file :
Tito_Scwrl_1F1Z.pdb
: