Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------VTCSPLQLSPCAGAITGSGPPSATCCSRLREQTPCLCGYYRDPNLRQYVNSPNAQKVARTCGVSVRC--------------------------------------------------------
3Q91 Chain:B ((40-220))
HDSVTVLLFNSSRRSLVLVKQAGVTVELCAGLVDQPGLSLEEVACKEAWEEC---GYHLAPSDLRRVATYWS-------GVSRQTMFYTEVTDAQRSGLIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSWFLSQVAPNLD
General information:
TITO was launched using:
RESULT:
Template:
3Q91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5714 for 281 contacts (-20.3/contact) +
2D Compatibility (PS) -6265 + (NN) -2155 + (LL) 1016
1D Compatibility (HY) -400 + (ID) 600
Total energy: -14118.0 ( -50.24 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_3Q91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q91-query.scw
PDB file :
Tito_Scwrl_3Q91.pdb
: