Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DFSALAPCDVT--QLTPCASAFAGKASPTAACCAKLMS-----------HGPVCLCRYKDDASLKRL--VDARHKRRVFTACKVPVPSC
1T12 Chain:A ((2-78))
-----ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIA-CTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17012 for 390 contacts (-43.6/contact) +
2D Compatibility (PS) -6102 + (NN) -1798 + (LL) 908
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -29054.0 ( -74.50 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: