Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVDCTTLVLSMADCLSFVSNDSTSKKPEGTCCSGLKTVLGTDAECLCEAFKSSAQFGVVLNVTKALALPSACKIKAPPASNCG
1N89 Chain:A ((5-65))
--------SQLAVCASAILSGA---KPSGECCGNLRAQ---Q-GCFCQYAKDP-TYGQYIRSPHARDTLTSCGLAVP------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24467 for 385 contacts (-63.6/contact) +
2D Compatibility (PS) -5961 + (NN) 1193 + (LL) 828
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -31207.0 ( -81.06 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: