Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLIGLASKCQKYVVKQGSSAKPSPECCKVVKNVNV----------PCVCSHVTKQIEDLISMKKVFDVAKSCGKKVT----PGTKCGSYTVPN
1SIY Chain:A ((1-90))
MTCGQVQGNL-AQCIGFLQKGG---VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI----
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8366 for 537 contacts (-15.6/contact) +
2D Compatibility (PS) -7592 + (NN) -303 + (LL) 256
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -19355.0 ( -36.04 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: