Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVSISGLTSCSPAVTPPNPAPPTSACCSALSHAD----------LRCLCSYKNSTLLPSL-GIDQKLPLKLPEKCRLPHRAPC
2ALG Chain:A ((3-80))
--TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL--SASVPGVNPNNAAALPGKCGVSIPY--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29488 for 429 contacts (-68.7/contact) +
2D Compatibility (PS) -6790 + (NN) -6188 + (LL) -12
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -46178.0 ( -107.64 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: