Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVCNLSSAGIRACQPAAAIRNPTDQPSSECCAALAGA----------DLACLCRYKNAAGVWVRFY-RIDINRAMGLPGKCGLAMPANC
2ALG Chain:A ((3-79))
-----TCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLS----ASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30003 for 417 contacts (-71.9/contact) +
2D Compatibility (PS) -6926 + (NN) -4631 + (LL) 752
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -44558.0 ( -106.85 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: