Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCDPEQLVACASPIFYGTAPSESCCSNLRE-----------QQKEGCLCQYAKDPMYASY--VNNTNARKTIAACGIPIPSC
1T12 Chain:A ((9-78))
----SNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQI--ACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20644 for 350 contacts (-59.0/contact) +
2D Compatibility (PS) -5824 + (NN) -772 + (LL) 604
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -30186.0 ( -86.25 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: