Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACD--PKQLQPCLAAITGGGQ-PSGDCCAKLK-----------EQQPCLCGFSKNPAFAQYISSPNSRKVLTACGI--------PYPSC---
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG-VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11976 for 374 contacts (-32.0/contact) +
2D Compatibility (PS) -6215 + (NN) 1247 + (LL) 296
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -21648.0 ( -57.88 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: