Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVL-----PGAVNPAP----NSNCCIALQATNKDCICNALR--------------------------------AATTF--TTTCNLPSLDCGITI
1BEA Chain:A ((14-109))
------HNPLPSCRWYVTSRTCGIGP--RLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39023 for 310 contacts (-125.9/contact) +
2D Compatibility (PS) -5692 + (NN) -5526 + (LL) 696
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -53945.0 ( -174.02 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: