Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQLNNLNVCAPFVVPGAANTNPNAECCNALEAVQH----------DCLCSTL----------QISSRLPSQCNLPPLTCGN
2ALG Chain:A ((3-77))
-TCGQVSSSLAPCIPYVRGG---GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVS------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24952 for 330 contacts (-75.6/contact) +
2D Compatibility (PS) -5765 + (NN) -6596 + (LL) 220
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -41043.0 ( -124.37 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: