Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLSNVQVCAAMVL------PGSG---R------PNSECCAALQSTNRDCLCNALRA----------------------ATSLPSLCNLPP-VDCGINT
1SM7 Chain:A ((13-106))
-------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPF--
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42126 for 350 contacts (-120.4/contact) +
2D Compatibility (PS) -5906 + (NN) -4069 + (LL) 100
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -58351.0 ( -166.72 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: