Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCQQALTELIPCRPFLIAVAPSPTAPCCTGVSDVKAAASTTEARRDLCECFEKNAPAY-GVKPEKAKLLPGLCGVTVPVPIDPSVNCATIT
1AFH Chain:A ((2-93))
ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50873 for 749 contacts (-67.9/contact) +
2D Compatibility (PS) -9426 + (NN) -2516 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -69465.0 ( -92.74 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: