Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------AITCEEVTYYLIPCIGYGVFGGTVAPSC---CTGIKTLDAAAK-----------TTEDRREKCNCVKEGAARIP-----GLNYTRVNEIPGLRGTTCPYKVTPDVDCSKVN-------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAA-AGSVVDALRAVRNA-----APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18845 for 413 contacts (-45.6/contact) +
2D Compatibility (PS) -8473 + (NN) 758 + (LL) -264
1D Compatibility (HY) -400 + (ID) 600
Total energy: -27824.0 ( -67.37 by residue)
QMean score : 0.259
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