Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QRVCGMSKEGFQACEPSVSSANPHPPPPSPACCMALNDAD----------LQCFCFFKNSKMLNAY-GIDFDRATALPVQCNLVKSFHC
2ALG Chain:A ((3-80))
--TCGQVSSSLAPCIPYVRGG-G---AVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL--SASVPGVNPNNAAALPGKCGVSIPY--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18554 for 429 contacts (-43.2/contact) +
2D Compatibility (PS) -6810 + (NN) -3618 + (LL) 408
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -32274.0 ( -75.23 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: