Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDIDLLLPCLNASRDPRVKPDKRCCDAIRQFLPPRKQKSAIDCLCRLATSKEAVALKINLSAAIAIPQKCGIKFEQRFYCQG
1L6H Chain:A ((3-69))
--CNAGQLTVCTGAIAGG-ARPTAACCSSLRAQ---------QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP---TCH-
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43887 for 493 contacts (-89.0/contact) +
2D Compatibility (PS) -6557 + (NN) 125 + (LL) 788
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -51581.0 ( -104.63 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: