Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTI-TFSPCLTNVGNTGTPPAYDSQCCKLVRDPKW--------TDQCLCAVVS-SHFPGVDETKALNLAHDCGRRVP----KGIYCDGRPVPP
2ALG Chain:A ((3-90))
-TCGQVSSSLAPCIPYVRGG-GAV--PPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15932 for 454 contacts (-35.1/contact) +
2D Compatibility (PS) -7880 + (NN) -5051 + (LL) 56
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -32557.0 ( -71.71 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: