Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMDDGLACLCDALTSDAASSLGI-RTSDAVQL-PSKCQAKTGLTYTHGYNCKGATVP
1HYP Chain:A ((10-79))
---------DLSICLNILGGSLGTVDDCCALIGGLGD-IEAIVCLCIQLR-----ALGILNLNRNLQLILNSCGR----SYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37210 for 427 contacts (-87.1/contact) +
2D Compatibility (PS) -6958 + (NN) -780 + (LL) 1548
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -51550.0 ( -120.73 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: