Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNAMTLQPCLAASQGKVAPDPACCTAIKNIGLS-----ADGPQCLCTLATGPLAKAN-GVSADAAMAIPKKCGLPVP----KGFMCNNKPVPGS
2ALG Chain:A ((7-90))
--VSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQ-LSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21943 for 464 contacts (-47.3/contact) +
2D Compatibility (PS) -7706 + (NN) -3431 + (LL) 64
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -37816.0 ( -81.50 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: