Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVD----------VPCVCSYLGAPGIKE--NISMEKVFYVAQQCGVSIP-----GNCGGSKRA
2ALG Chain:A ((1-91))
MITCGQVSSSL-APCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNC-LKQ--LSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29470 for 465 contacts (-63.4/contact) +
2D Compatibility (PS) -7604 + (NN) -917 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -41383.0 ( -89.00 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: