Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVAAQCDAGQLVVCAPAI--LGGAMPTASCCSKLREQE---QQGCFCEYLRNPAYAGYINSQTA-RGAIAACNVTLPQCS
1HYP Chain:A ((6-73))
----PSCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS--
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27967 for 386 contacts (-72.5/contact) +
2D Compatibility (PS) -6268 + (NN) 453 + (LL) 916
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -38716.0 ( -100.30 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: