Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGCDNDRQDMIRECAKYQKFPKEPKKDPSKACCAVWQKAD----------FPCLCKDV------TKELEKVAYVAKFCKWPFP----SGYKCGSYTFPLGQ
2ALG Chain:A ((3-91))
-TCGQVSSSL-APCIPYVRGG----GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9946 for 418 contacts (-23.8/contact) +
2D Compatibility (PS) -7248 + (NN) -4094 + (LL) 568
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -23320.0 ( -55.79 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: