Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGL-GIDATVCLCTAIHLKVLGLNVDIPLALKLLVTCGRELPNGLTC--
2HFT Chain:? ((107-218))
NLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFL--SLRDVFGKDLIYTLYYWKSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVN-----------RKSTDSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36196 for 420 contacts (-86.2/contact) +
2D Compatibility (PS) -8889 + (NN) -2487 + (LL) 1340
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -45482.0 ( -108.29 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: