Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYCDLTTLLPCLSSVIGDKPTPPSEECCAVVRVVD----------PDCVCGHVGDDEGIT-GINVKLAAQIPKKCGRHVP----KGFKCGEH
2ALG Chain:A ((8-90))
----SSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQL-SASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT-
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29907 for 413 contacts (-72.4/contact) +
2D Compatibility (PS) -7035 + (NN) -3800 + (LL) -284
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -43676.0 ( -105.75 by residue)
QMean score : 0.128
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: