Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVVSQCSGSYVNGSPPSAGCCGAARAVS----------DGCLCPKVTPQIAD--AVNKQRIQAMASACNRPLPRTCGALQFPSRK
2ALG Chain:A ((3-79))
-TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQ-LSASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25152 for 411 contacts (-61.2/contact) +
2D Compatibility (PS) -6786 + (NN) -1557 + (LL) 636
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -36809.0 ( -89.56 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: