Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCDTSKFTNLQACLPAATGSGSVTSSCCSAMMAYRSNPSCLCSTLVYAKSQLSSINLNNALAIPKACGYSSYIPSGFTCQGITVPR
1L6H Chain:A ((6-69))
--------GQLTVCTGAIAGGARPTAACCSSLRAQ---QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIA--LP---TCH------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30958 for 453 contacts (-68.3/contact) +
2D Compatibility (PS) -6463 + (NN) -383 + (LL) 488
1D Compatibility (HY) -800 + (ID) 950
Total energy: -39066.0 ( -86.24 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: