Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADCKEERRVAINACKPILYG-KDPTPACCERIRVTH----------IECVCPVITPKLAA--LVDVNRMVRLIEGCGRNVP----RHYKCGSITTP
2ALG Chain:A ((3-91))
-TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32772 for 446 contacts (-73.5/contact) +
2D Compatibility (PS) -7493 + (NN) -2261 + (LL) 364
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -44762.0 ( -100.36 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: