Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQDLKICVPYVQKKGPKIPPSQACCDAIKGV-D---ILCVCHHLPPDIGELISIEKVVF-VLQVCREPLAPGTKCGSKNIKALLS
1HYP Chain:A ((25-79))
-------------------------VDDCCALIGGLGDIEAIVCLCIQLRA-LGI-LNLNRNLQLILNSCGRSYPSNATCPR--------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36515 for 265 contacts (-137.8/contact) +
2D Compatibility (PS) -5224 + (NN) -3229 + (LL) 1924
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -50094.0 ( -189.03 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: