Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------ALSCGQIQLTVAPCIGYLR--TPGPSVP----APCCNGIRSVYYQAKTTADRQGVCRCLKSTTLSL-------PGLN----LPALAGAPAKCGVNVPYKVAPSIDCNTVRH--------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48412 for 531 contacts (-91.2/contact) +
2D Compatibility (PS) -8393 + (NN) -3381 + (LL) 1124
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -64112.0 ( -120.74 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: