Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPVCPLNQSELGICVNVLGLISITTSNAAQCCSILAGLNNV-----SLVSVCACEAVRLNILNLLGITVNLNLRLNGLLGLCRLPVQ----PGFNCLL
2ALG Chain:A ((4-89))
---CGQVSSSLAPCIPYVRG---GGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVP-GVNPNNAAA-LPGKCGVSIPYKISASTNCA-
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67340 for 490 contacts (-137.4/contact) +
2D Compatibility (PS) -7838 + (NN) -1720 + (LL) 1184
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -78214.0 ( -159.62 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: