Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MQLPILQVIIPI------IASMLCFFTRKHKVSWFISFTTTIVTLFISSVLLIKTYNGETITYHLGNWAPPYGIELRIDVLNSLILTLVNFVALI-SVLYSFYINEKEISKNKI---TGLYSLFLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGKDKKALVAAFEYLISGTIGATFYLLGIGLLYSTTGTLNMSDMAERIVPLYNNNIVKLGTLFIFVGLSNKM--ALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLL--KLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHII-NHSI---IKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLTNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYSNPIRLVVEKLVF-- |
| 4U1D Chain:A ((9-496)) | FRPENAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVEPVVFKFLEIGVELK--KGKLLKDGLHQYKKLI--QGSTEGLVSVGAVARKFIDLVESKIASEQTRADELQKQEIDAITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKY--QRKNEFKRLAEMLRQHLDAANYQQSK-----SGNNLVDLSD--ADTLQRYLDQRFQQVDVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHTTAWKKFYKLYSTNPRATEEEFKTYSSTIFLSAISTQLDEIPSIGYDPHL----RMYRLLNLDAKPTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNF------DVDTVKQQLENLLVKLS----------------SKTYFSQYIAPLRDVIMRRVFVAASQK-----FTTVSQSELYKLATLPAPLDLSAWDIEKSLLQAAV--------EDYVSITIDHESAKVTFAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -427573 for 3277 contacts (-130.5/contact) +
2D Compatibility (PS) -43485 + (NN) 2025 + (LL) 4628
1D Compatibility (HY) -7600 + (ID) 3550
Total energy: -475555.0 ( -145.12 by residue)
QMean score : 0.233
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